Morgan, Xochitl C.: search on Z-Library

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1

Oral probiotics reduce halitosis in patients wearing orthodontic braces: A randomized, triple-blind, placebo-controlled trial

Benic, Gareth Z., Farella, Mauro, Morgan, Xochitl C, Viswam, Jay, Heng, Nicholas C, Cannon, Richard D, Mei, Li

Journal:

Journal of Breath Research

Year:

2019

Language:

english

File:

PDF, 1.62 MB

english, 2019

2

Meta'omic Analytic Techniques for Studying the Intestinal Microbiome

Morgan, Xochitl C., Huttenhower, Curtis

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

3

Diverse hydrogen production and consumption pathways influence methane production in ruminants

Greening, Chris, Geier, Renae, Wang, Cecilia, Woods, Laura C., Morales, Sergio E., McDonald, Michael J., Rushton-Green, Rowena, Morgan, Xochitl C., Koike, Satoshi, Leahy, Sinead C., Kelly, William J.,

Journal:

The ISME Journal

Year:

2019

File:

PDF, 2.91 MB

2019

4

Biodiversity and functional genomics in the human microbiome

Morgan, Xochitl C., Segata, Nicola, Huttenhower, Curtis

Journal:

Trends in Genetics

Year:

2013

Language:

english

File:

PDF, 3.26 MB

english, 2013

5

Urban Transit System Microbial Communities Differ by Surface Type and Interaction with Humans and the Environment

Hsu, Tiffany, Joice, Regina, Vallarino, Jose, Abu-Ali, Galeb, Hartmann, Erica M., Shafquat, Afrah, DuLong, Casey, Baranowski, Catherine, Gevers, Dirk, Green, Jessica L., Morgan, Xochitl C., Spengler,

Journal:

Year:

2016

Language:

english

File:

PDF, 5.62 MB

english, 2016

6

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

Gevers, Dirk, Kugathasan, Subra, Denson, Lee A., Vázquez-Baeza, Yoshiki, Van Treuren, Will, Ren, Boyu, Schwager, Emma, Knights, Dan, Song, Se Jin, Yassour, Moran, Morgan, Xochitl C., Kostic, Aleksanda

Journal:

Cell Host & Microbe

Year:

2014

Language:

english

File:

PDF, 2.64 MB

english, 2014

7

Experimental design and quantitative analysis of microbial community multiomics

Mallick, Himel, Ma, Siyuan, Franzosa, Eric A., Vatanen, Tommi, Morgan, Xochitl C., Huttenhower, Curtis

Journal:

Year:

2017

Language:

english

File:

PDF, 1.25 MB

english, 2017

8

PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes

Segata, Nicola, Börnigen, Daniela, Morgan, Xochitl C., Huttenhower, Curtis

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 3.56 MB

english, 2013

9

bioBakery: a meta’omic analysis environment

McIver, Lauren J, Abu-Ali, Galeb, Franzosa, Eric A, Schwager, Randall, Morgan, Xochitl C, Waldron, Levi, Segata, Nicola, Huttenhower, Curtis

Journal:

Year:

2017

Language:

english

File:

PDF, 114 KB

english, 2017

10

Agricultural origins of a highly-persistent lineage of vancomycin-resistant Enterococcus faecalis in New Zealand

Rushton-Green, Rowena, Darnell, Rachel L, Taiaroa, George, Carter, Glen P, Cook, Gregory M, Morgan, Xochitl C

Journal:

Applied and Environmental Microbiology

Year:

2019

Language:

english

File:

PDF, 5.07 MB

english, 2019

11

Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment

Kim, Jonghwan, Bhinge, Akshay A, Morgan, Xochitl C, Iyer, Vishwanath R

Journal:

Year:

2004

Language:

english

File:

PDF, 278 KB

english, 2004

12

Determining Microbial Products and Identifying Molecular Targets in the Human Microbiome

Joice, Regina, Yasuda, Koji, Shafquat, Afrah, Morgan, Xochitl C., Huttenhower, Curtis

Journal:

Cell Metabolism

Year:

2014

Language:

english

File:

PDF, 2.24 MB

english, 2014

13

Effect of Chitosan on Salmonella Typhimurium in Broiler Chickens

Menconi, Anita, Pumford, Neil R., Morgan, Marion J., Bielke, Lisa R., Kallapura, Gopala, Latorre, Juan D., Wolfenden, Amanda D., Hernandez-Velasco, Xochitl, Hargis, Billy M., Tellez, Guillermo

Journal:

Foodborne Pathogens & Disease

Year:

2014

Language:

english

File:

PDF, 128 KB

english, 2014

14

Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes

Yassour, Moran, Lim, Mi Young, Yun, Hyun Sun, Tickle, Timothy L., Sung, Joohon, Song, Yun-Mi, Lee, Kayoung, Franzosa, Eric A., Morgan, Xochitl C., Gevers, Dirk, Lander, Eric S., Xavier, Ramnik J., Bir

Journal:

Genome Medicine

Year:

2016

Language:

english

File:

PDF, 2.53 MB

english, 2016

15

Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining

Xochitl C Morgan, Shulin Ni, Daniel P Miranker, Vishwanath R Iyer

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.16 MB

english, 2007

16

Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease

Morgan, Xochitl C, Kabakchiev, Boyko, Waldron, Levi, Tyler, Andrea D, Tickle, Timothy L, Milgrom, Raquel, Stempak, Joanne M, Gevers, Dirk, Xavier, Ramnik J, Silverberg, Mark S, Huttenhower, Curtis

Journal:

Year:

2015

Language:

english

File:

PDF, 2.45 MB

english, 2015

17

Inferring the annual, seasonal, and spatial distributions of marine species from complementary research and commercial vessels’ catch rates

Bourdaud, Pierre, Travers-Trolet, Morgane, Vermard, Youen, Cormon, Xochitl, Marchal, Paul

Journal:

ICES Journal of Marine Science

Year:

2017

Language:

english

File:

PDF, 567 KB

english, 2017

18

Molecular and morphological systematics of Dolabrifera Gray, 1847 (Mollusca: Gastropoda: Heterobranchia: Aplysiomorpha)

Valdés, Ángel, Breslau, Eric, Padula, Vinicius, Schrödl, Michael, Camacho, Yolanda, Malaquias, Manuel António E, Alexander, Jennifer, Bottomley, Morgan, Vital, Xochitl G, Hooker, Yuri, Gosliner, Terre

Journal:

Zoological Journal of the Linnean Society

Year:

2017

Language:

english

File:

PDF, 3.76 MB

english, 2017

19

Microbial biogeography of 925 geothermal springs in New Zealand

Power, Jean F., Carere, Carlo R., Lee, Charles K., Wakerley, Georgia L. J., Evans, David W., Button, Mathew, White, Duncan, Climo, Melissa D., Hinze, Annika M., Morgan, Xochitl C., McDonald, Ian R., C

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 2.74 MB

english, 2018

20

Invited Commentary: Improving accessibility of the Human Microbiome Project data through integration with R/Bioconductor

Griffith, Jocelyn C, Morgan, Xochitl C

Journal:

American Journal of Epidemiology

Year:

2019

Language:

english

File:

PDF, 757 KB

english, 2019

21

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling

Franzosa, Eric A., Hsu, Tiffany, Sirota-Madi, Alexandra, Shafquat, Afrah, Abu-Ali, Galeb, Morgan, Xochitl C., Huttenhower, Curtis

Journal:

Nature Reviews Microbiology

Year:

2015

Language:

english

File:

PDF, 617 KB

english, 2015

22

Electing a candidate: a speculative history of the bacterial phylum OP10

Peter F. Dunfield, Ivica Tamas, Kevin C. Lee, Xochitl C. Morgan, Ian R. McDonald, Matthew B. Stott

Journal:

Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 260 KB

english, 2012

23

Chapter 12: Human Microbiome Analysis

Morgan, Xochitl C., Huttenhower, Curtis, Lewitter, Fran, Kann, Maricel

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 541 KB

english, 2012

24

Complete genome sequence of the thermophilicAcidobacteria,Pyrinomonas methylaliphatogenestype strain K22T

Lee, Kevin C. Y., Morgan, Xochitl C., Power, Jean F., Dunfield, Peter F., Huttenhower, Curtis, Stott, Matthew B.

Journal:

Standards in Genomic Sciences

Year:

2015

Language:

english

File:

PDF, 1.91 MB

english, 2015

25

The Chthonomonas calidirosea genome is highly conserved across geography and distinct chemical and microbial environments in the Taupō Volcanic Zone, New Zealand

Lee, Kevin C., Stott, Matthew B., Dunfield, Peter F., Huttenhower, Curtis, McDonald, Ian R., Morgan, Xochitl C.

Journal:

Applied and Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 3.86 MB

english, 2016

26

Diverse hydrogen production and consumption pathways influence methane production in ruminants

Greening, Chris, Geier, Renae, Wang, Cecilia, Woods, Laura C., Morales, Sergio E., McDonald, Michael J., Rushton-Green, Rowena, Morgan, Xochitl C., Koike, Satoshi, Leahy, Sinead C., Kelly, William J.,

Journal:

The ISME Journal

Year:

2019

Language:

english

File:

PDF, 2.91 MB

english, 2019

27

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

Xochitl C Morgan, Timothy L Tickle, Harry Sokol, Dirk Gevers, Kathryn L Devaney, Doyle V Ward, Joshua A Reyes, Samir A Shah, Neal LeLeiko, Scott B Snapper, Athos Bousvaros, Joshua Korzenik, Bruce E Sa

Journal:

Year:

2012

Language:

english

File:

PDF, 553 KB

english, 2012

28

Functional profiling of the gut microbiome in disease-associated inflammation

BÃ¶rnigen, Daniela, Morgan, Xochitl C, Franzosa, Eric A, Ren, Boyu, Xavier, Ramnik J, Garrett, Wendy S, Huttenhower, Curtis

Journal:

Genome Medicine

Year:

2013

Language:

english

File:

PDF, 346 KB

english, 2013

29

Genomic analysis of Chthonomonas calidirosea, the first sequenced isolate of the phylum Armatimonadetes

Lee, Kevin C-Y, Morgan, Xochitl C, Dunfield, Peter F, Tamas, Ivica, McDonald, Ian R, Stott, Matthew B

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

30

850a The treatment-naive microbiome in early-onset Crohn's Disease

Gevers, Dirk, Kugathasan, Subra, Denson, Lee, Vázquez-Baeza, Yoshiki, Van Treuren, Will, Ren, Boyu, Schwager, Emma, Knights, Dan, Song, Se Jin, Yassour, Moran, Morgan, Xochitl, Kostic, Aleksandar D.,

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 143 KB

english, 2014

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